This plugin is built into ImageJ 1.45j and later as the Image>Adjust>Threshold command.
This plugin allows the user to segment the current image using any of the 15 thresholding
methods from Gabriel Landini’s Auto Threshold plugin. More
information about each of the methods is available as comments in the source code.
The MultiThresholder is macro recordable. Here is an example macro that uses the “Cell Colony” sample
image to demonstate the 15 thresholding methods supported by MultiThresholder:
To run this macro, select it and copy it to the clipboard (ctrl-c), switch to ImageJ,
use Plugins/New (shift-n) to open a macro window,
paste in the macro (ctrl-v),
then run it using the macro editor’s File/Run Macro command (ctrl-r).
2005/07/21: First version 2005/08/03: Works with 16-bit and 32-bit images; adds “Refresh” button 2007/01/25: Fixes bug that caused an exception when running the sample macro using the MBF ImageJ bundle 2009/04/12: Uses the 13 thresholding methods from Gabriel Landini’s Auto Threshold plugin;
adds “Dark Background” checkbox 2009/04/14: Adds “Mean” and “MinError(I)” methods; adds “Stack Histogram” checkbox
Author: Greg Joss (email@example.com) Date: 2001/03/13 Source: ResultsAndText_gj.java Installation: Expand the results.zip archive in the plugins folder and restart ImageJ. Description: This plug-in extends ResultsTable
Author: Francois Richard (richard@SCIENCE.UOTTAWA.CA) Date: 2000/9/29 Source: Comment_Writer.java Installation: Copy Comment_Writer.class to the plugins folder and restart ImageJ. Description: This is a simple plugin that
Author: Markus Hasselblatt (MHasselblatt@zyomyx.com) Date: 1999/11/16 Requirements: ImageJ 1.10 or later Limitations: Only works with 8-bit images Source: Auto_Corr.java Installation: Copy Auto_Corr.class to the plugins
Author: Dr. Gholam Reza Kaka, Kaiser Niknam Research Center of Neuroscience, Baqiyatallah Medical Sciences University, Tehran, Iran gh_kaka at Yahoo niknam.kaiser at Gmail Source: Densitometry_1_Channel_.java
Author: Wayne Rasband (firstname.lastname@example.org) History: 2000/11/28: First version 2003/01/28: Uses the image or selection min and max; works correctly with signed images Source: SixteenBit_Histogram.java Installation: